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SRX19686282: GSM7100763: 1012-2 sensitive clinical isolate; Trichomonas vaginalis; RNA-Seq
1 ILLUMINA (Illumina HiSeq 4000) run: 24.6M spots, 7.4G bases, 2.2Gb downloads

External Id: GSM7100763_r1
Submitted by: STD research program, Medicine-Infectious Diseases, The University of Alabama at Birmingham
Study: Identification of Trichomonas vaginalis 5-nitroimidazole resistance targets
PRJNA945071 • SRP427550 • All experiments • All runs
show Abstracthide Abstract
We aimed to delineate mechanisms of T. vaginalis resistance using transcriptome profiling of metronidazole (MTZ)-resistant and sensitive T. vaginalis clinical isolates. Overall design: RNA sequencing, bioinformatics, and biostatistical analyses were performed to identify differentially expressed genes (DEGs) in the MTZ-resistant vs. sensitive T. vaginalis isolates.
Sample: 1012-2 sensitive clinical isolate
SAMN33773572 • SRS17055563 • All experiments • All runs
Organism: Trichomonas vaginalis
Library:
Name: GSM7100763
Instrument: Illumina HiSeq 4000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: RNA was harvested using Trizol reagent (Invitrogen, Carlsbad, CA), according to the manufacturer's instructions. Pre-made library -- no library preparation performed
Runs: 1 run, 24.6M spots, 7.4G bases, 2.2Gb
Run# of Spots# of BasesSizePublished
SRR2387423824,563,8027.4G2.2Gb2023-04-30

ID:
26993835

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